allestimates: Effect Estimates from All Models

Package: allestimates 0.2.3

allestimates: Effect Estimates from All Models

Estimates and plots effect estimates from models with all possible combinations of a list of variables. It can be used for assessing treatment effects in clinical trials or risk factors in bio-medical and epidemiological research. Like Stata command 'confall' (Wang Z (2007) <doi:10.1177/1536867X0700700203> ), 'allestimates' calculates and stores all effect estimates, and plots them against p values or Akaike information criterion (AIC) values. It currently has functions for linear regression: all_lm(), logistic and Poisson regression: all_glm(), and Cox proportional hazards regression: all_cox().

Authors:Zhiqiang Wang [aut, cre]

allestimates_0.2.3.tar.gz
allestimates_0.2.3.zip(r-4.7)allestimates_0.2.3.zip(r-4.6)allestimates_0.2.3.zip(r-4.5)
allestimates_0.2.3.tgz(r-4.6-any)allestimates_0.2.3.tgz(r-4.5-any)
allestimates_0.2.3.tar.gz(r-4.7-any)allestimates_0.2.3.tar.gz(r-4.6-any)
allestimates_0.2.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
allestimates/json (API)

# Install 'allestimates' in R:

install.packages('allestimates', repos = c('https://uqwang.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

diab_df - Example data: Health outcomes of 2372 adults with and without diabetes

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.70 score 6 scripts 398 downloads 7 exports 34 dependencies

Last updated from:397cb1990e. Checks:7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	NOTE	175
source / vignettes	OK	214
linux-release-x86_64	NOTE	170
macos-release-arm64	NOTE	171
macos-oldrel-arm64	NOTE	167
windows-devel	NOTE	124
windows-release	NOTE	130
windows-oldrel	NOTE	115
wasm-release	OK	150

Exports:all_cox all_glm all_lm all_plot all_plot_aic all_plot_aic2 all_plot2

Dependencies:backports broom cli cpp11 dplyr farver generics ggplot2 glue gtable isoband labeling lattice lifecycle magrittr Matrix pillar pkgconfig purrr R6 RColorBrewer rlang S7 scales stringi stringr survival tibble tidyr tidyselect utf8 vctrs viridisLite withr

allestimates-vignette

Overview | Installation | Getting Started | Calculate hazard ratios from all possible models using all_cox | Plot all hazard ratios against p values using all_plot | Plot all hazard ratios with a specific variable included or not included in model using all_plot2 | Calculate odds ratios from all possible models using all_glm | Calculate coefficients (differences) from all possible models using all_lm

Rendered fromallestimates-vignette.Rmdusingknitr::rmarkdown

Help page	Topics
Estimates all possible effect estimates using Cox Proportional Hazards regression models	all_cox
Estimates all possible effect estimates using 'glm'	all_glm
Estimates all possible effect estimates using 'lm'	all_lm
Plot all effect estimates against p values	all_plot
Draws scatter plot with all effect estimates against AIC	all_plot_aic
Draws multiple scatter plots of all effect estimates against AIC	all_plot_aic2
Plots all effect estimates against p values with each specific variable in the models	all_plot2
Effect estimates from models with all possible combinations of variables	allestimates
Example data: Health outcomes of 2372 adults with and without diabetes	diab_df

Help page

Topics

Estimates all possible effect estimates using Cox Proportional Hazards regression models

all_cox

Estimates all possible effect estimates using 'glm'

all_glm

Estimates all possible effect estimates using 'lm'

all_lm

Plot all effect estimates against p values

all_plot

Draws scatter plot with all effect estimates against AIC

all_plot_aic